Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM48Q8IWZ4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM48Q8IWZ4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC005034.1-201ENST00000426657 489 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AL589987.1-201ENST00000453380 819 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 RN7SL692P-201ENST00000464677 288 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 MEIS3P1-201ENST00000495167 958 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC005225.4-201ENST00000557330 545 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC092337.1-201ENST00000568699 1129 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM48Q8IWZ4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC023310.3-201ENST00000557027 670 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC100756.1-201ENST00000562736 682 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC138749.3-201ENST00000567691 622 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 LINC01115-203ENST00000606068 577 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC116165.1-201ENST00000611806 668 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 AC007431.3-201ENST00000623221 587 ntBASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM48Q8IWZ4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms