Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC026954.1-201ENST00000429771 1293 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 RPS2P36-201ENST00000456516 831 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC005915.1-201ENST00000624912 2018 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 TMEM198B-204ENST00000484016 896 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 BRI3BPP1-201ENST00000594224 787 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AL158212.4-201ENST00000624062 1286 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 AC105020.1-201ENST00000435356 2205 ntBASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RP1L1Q8IWN7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC016629.1-201ENST00000596579 586 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 RPL13P2-201ENST00000440687 659 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 VDAC1P7-201ENST00000462417 847 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 AC124283.3-201ENST00000570869 594 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 MIR4321-201ENST00000592276 80 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 REXO1L1P-202ENST00000608646 1974 ntBASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.22□□□□□ -0.13
RP1L1Q8IWN7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms