Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 AC079316.1-201ENST00000548397 411 ntBASIC16.65■□□□□ 0.26
RNF135Q8IUD6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF135Q8IUD6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF135Q8IUD6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
RNF135Q8IUD6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF135Q8IUD6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF135Q8IUD6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL391005.1-201ENST00000623953 2435 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 SERPINA7P1-201ENST00000443077 631 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL355864.2-201ENST00000447420 863 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL022328.3-201ENST00000607943 679 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 LINC01144-201ENST00000626198 1710 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 ME2P1-201ENST00000426028 1970 ntBASIC16.64■□□□□ 0.25
RNF135Q8IUD6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF135Q8IUD6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.63■□□□□ 0.25
RNF135Q8IUD6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms