Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC148477.4-201ENST00000613430 1793 ntBASIC14.22□□□□□ -0.13
ATG4DQ86TL0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC087499.5-201ENST00000452760 1342 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC015922.1-201ENST00000421102 1152 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 SDHAP3-202ENST00000515467 728 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC015910.1-201ENST00000579400 975 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 RN7SL204P-201ENST00000582831 262 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 LINC01115-203ENST00000606068 577 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AL844908.2-201ENST00000609461 460 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AF228730.6-201ENST00000641497 218 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC084121.3-201ENST00000641716 218 ntBASIC14.21□□□□□ -0.13
ATG4DQ86TL0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATG4DQ86TL0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATG4DQ86TL0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TSPY16P-201ENST00000449843 468 ntBASIC14.2□□□□□ -0.14
ATG4DQ86TL0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ZNF890P-202ENST00000530367 1156 ntBASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AL109936.8-201ENST00000641772 604 ntBASIC14.2□□□□□ -0.14
ATG4DQ86TL0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 AC100757.3-201ENST00000622361 1406 ntBASIC14.2□□□□□ -0.14
ATG4DQ86TL0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ATG4DQ86TL0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms