Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AC011477.6-201ENST00000604980 1927 ntBASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 KRT18P64-201ENST00000434946 1219 ntBASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AP005018.1-201ENST00000525475 301 ntBASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AC105233.6-201ENST00000642093 218 ntBASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.37■□□□□ 0.21
RFWD3Q6PCD5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 PPT1-215ENST00000641471 2368 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 AL607033.1-201ENST00000623900 1599 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 AC092337.1-201ENST00000568699 1129 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 CHCHD2P3-201ENST00000603038 451 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 AC097359.3-201ENST00000603982 1210 ntBASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFWD3Q6PCD5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 AC112504.1-201ENST00000623415 1841 ntBASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFWD3Q6PCD5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms