Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 MIR769-201ENST00000390225 118 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 RN7SL769P-201ENST00000469386 295 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 COX5BP1-201ENST00000507622 393 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 AC012313.1-201ENST00000593393 3059 ntBASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 HINT2P1-201ENST00000419438 481 ntBASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 CU633904.3-201ENST00000624042 1029 ntBASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 PRSS30P-206ENST00000641773 873 ntBASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LYSMD4Q5XG99 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AL139094.1-201ENST00000405549 1188 ntBASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AC245884.6-201ENST00000515672 1067 ntBASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 PPY2P-201ENST00000582808 702 ntBASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD4Q5XG99 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms