Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AP003680.1-201ENST00000598970 3660 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC092850.2-201ENST00000623821 2697 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC023157.3-201ENST00000619086 2088 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AC104794.3-201ENST00000566840 1248 ntBASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AC004461.2-201ENST00000629517 803 ntBASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AC068587.6-202ENST00000641839 5619 ntBASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TTC39BQ5VTQ0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 AC138761.1-201ENST00000584393 385 ntBASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 AC136621.1-201ENST00000624017 2304 ntBASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TTC39BQ5VTQ0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.33■□□□□ 0.21
TTC39BQ5VTQ0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms