Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC073621.1-201ENST00000392730 636 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 PMS2P4-201ENST00000412466 1052 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 KRT18P27-201ENST00000427733 1299 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC093724.1-201ENST00000448659 1027 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC079781.3-201ENST00000449110 356 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC105339.3-201ENST00000560043 636 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 AL356488.2-201ENST00000602755 427 ntBASIC12.54□□□□□ -0.4
FAM78BQ5VT40 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
FAM78BQ5VT40 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AP001282.1-201ENST00000531301 1499 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC013726.1-201ENST00000563747 2285 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 HNRNPDP1-201ENST00000439535 754 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC018712.1-201ENST00000455767 687 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AP002469.2-201ENST00000531724 424 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 KRT126P-201ENST00000549467 1181 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MIR3909-201ENST00000579518 119 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC008667.4-201ENST00000607370 168 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AL031008.1-201ENST00000619963 541 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC148477.8-201ENST00000624298 468 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AC005593.1-201ENST00000624894 515 ntBASIC12.53□□□□□ -0.4
FAM78BQ5VT40 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms