Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.7□□□□□ -0.22
ATPAF1Q5TC12 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 MIR1233-2-201ENST00000408138 82 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 MIR1233-1-201ENST00000408722 82 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC004835.2-201ENST00000603762 682 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC055717.3-201ENST00000622967 595 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC079781.4-201ENST00000641908 219 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 OR2I1P-209ENST00000641730 5365 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 AC091951.1-201ENST00000512854 2465 ntBASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ATPAF1Q5TC12 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC004461.1-201ENST00000412461 403 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AC004967.1-201ENST00000453589 447 ntBASIC13.68□□□□□ -0.22
ATPAF1Q5TC12 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms