Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 AL589987.1-201ENST00000453380 819 ntBASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 AL121723.1-201ENST00000445194 1519 ntBASIC16.91■□□□□ 0.3
CBWD3Q5JTY5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 AC022144.1-201ENST00000602255 1580 ntBASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 CYMP-203ENST00000474680 1263 ntBASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 AC092337.1-201ENST00000568699 1129 ntBASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.9■□□□□ 0.3
CBWD3Q5JTY5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CBWD3Q5JTY5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 TCAF2P1-201ENST00000291129 2421 ntBASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 AL133267.1-201ENST00000398220 340 ntBASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 FAM8A3P-201ENST00000427218 844 ntBASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBWD3Q5JTY5 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms