Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 AC093909.1-201ENST00000504731 1122 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.65□□□□□ -0.06
RFX4Q33E94 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.65□□□□□ -0.06
RFX4Q33E94 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 AC023141.13-201ENST00000604991 943 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 AL031008.1-201ENST00000619963 541 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 AC010507.1-201ENST00000633895 436 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFX4Q33E94 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 AC104581.4-201ENST00000623126 3052 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RFX4Q33E94 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.65□□□□□ -0.06
RFX4Q33E94 AL589702.1-201ENST00000641229 1509 ntBASIC14.65□□□□□ -0.06
RFX4Q33E94 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.65□□□□□ -0.06
RFX4Q33E94 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.65□□□□□ -0.07
RFX4Q33E94 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.65□□□□□ -0.07
RFX4Q33E94 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RFX4Q33E94 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
RFX4Q33E94 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AC138969.2-201ENST00000532739 9932 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AL450487.1-201ENST00000426799 995 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.64□□□□□ -0.07
RFX4Q33E94 RNA5SP415-201ENST00000517246 115 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.64□□□□□ -0.07
RFX4Q33E94 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.64□□□□□ -0.07
RFX4Q33E94 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.64□□□□□ -0.07
RFX4Q33E94 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 AC104692.2-201ENST00000603054 253 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 AC073439.1-201ENST00000624121 1774 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 ST20-AS1-201ENST00000560255 4223 ntBASIC14.64□□□□□ -0.07
RFX4Q33E94 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFX4Q33E94 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.64□□□□□ -0.07
RFX4Q33E94 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFX4Q33E94 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFX4Q33E94 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.63□□□□□ -0.07
RFX4Q33E94 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms