Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AKR7A2P1-201ENST00000460134 915 ntBASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 AC092364.2-201ENST00000596710 2692 ntBASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 NUS1P3-201ENST00000423502 862 ntBASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AL021578.1-201ENST00000613646 709 ntBASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM71Q2Q1W2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 AL139094.1-201ENST00000405549 1188 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 MIR663B-201ENST00000408361 115 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 BX284668.4-201ENST00000453917 508 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 IGHJ2P-201ENST00000454480 60 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 AC091804.1-201ENST00000486888 567 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 RNA5SP423-201ENST00000517127 109 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 ACTG1P17-201ENST00000558391 1119 ntBASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM71Q2Q1W2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms