Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CNN2P8-201ENST00000421872 913 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 IGHJ2P-201ENST00000454480 60 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AC093433.1-201ENST00000458048 571 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AL021578.1-201ENST00000613646 709 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 DBET-201ENST00000630918 3363 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AC005622.1-201ENST00000636801 1703 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AL607033.1-201ENST00000623900 1599 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 GNRHR2-203ENST00000581100 1187 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AC005252.2-201ENST00000624630 1141 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AL136379.1-201ENST00000623471 2642 ntBASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.72■□□□□ 0.27
CTC1Q2NKJ3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTC1Q2NKJ3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTC1Q2NKJ3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.71■□□□□ 0.27
CTC1Q2NKJ3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.71■□□□□ 0.27
CTC1Q2NKJ3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CTC1Q2NKJ3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms