Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDS5AQ29RF7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AC009090.5-201ENST00000624886 2285 ntBASIC18.58■□□□□ 0.57
PDS5AQ29RF7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 YBX1P6-201ENST00000442962 1002 ntBASIC18.58■□□□□ 0.57
PDS5AQ29RF7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 RNA5SP486-201ENST00000515961 83 ntBASIC18.58■□□□□ 0.57
PDS5AQ29RF7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AC078819.1-201ENST00000547454 765 ntBASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AC012085.1-201ENST00000548270 765 ntBASIC18.58■□□□□ 0.57
PDS5AQ29RF7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDS5AQ29RF7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PDS5AQ29RF7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AC092658.1-201ENST00000505836 891 ntBASIC18.57■□□□□ 0.56
PDS5AQ29RF7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 MIR6799-201ENST00000620297 69 ntBASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AC138951.2-201ENST00000623455 1161 ntBASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AC006453.4-201ENST00000636949 1252 ntBASIC18.57■□□□□ 0.56
PDS5AQ29RF7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDS5AQ29RF7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms