Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 PMS2P2-201ENST00000425039 1128 ntBASIC13.82□□□□□ -0.2
HIST3H3Q16695 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 KRT18P43-201ENST00000469825 1281 ntBASIC13.82□□□□□ -0.2
HIST3H3Q16695 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AL390754.1-201ENST00000619088 582 ntBASIC13.82□□□□□ -0.2
HIST3H3Q16695 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H3Q16695 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H3Q16695 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AL121723.1-201ENST00000445194 1519 ntBASIC13.81□□□□□ -0.2
HIST3H3Q16695 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC022144.1-201ENST00000602255 1580 ntBASIC13.81□□□□□ -0.2
HIST3H3Q16695 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC000095.1-201ENST00000603208 874 ntBASIC13.81□□□□□ -0.2
HIST3H3Q16695 AC106028.4-201ENST00000614509 607 ntBASIC13.81□□□□□ -0.2
HIST3H3Q16695 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 AL645728.2-202ENST00000641679 227 ntBASIC13.81□□□□□ -0.2
HIST3H3Q16695 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H3Q16695 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H3Q16695 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST3H3Q16695 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H3Q16695 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms