Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 RNA5SP416-201ENST00000516838 111 ntBASIC14.64□□□□□ -0.07
CD47Q08722 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.64□□□□□ -0.07
CD47Q08722 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.64□□□□□ -0.07
CD47Q08722 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.64□□□□□ -0.07
CD47Q08722 KRT19P2-202ENST00000557173 1012 ntBASIC14.64□□□□□ -0.07
CD47Q08722 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.64□□□□□ -0.07
CD47Q08722 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.64□□□□□ -0.07
CD47Q08722 AC134407.2-201ENST00000625089 1978 ntBASIC14.64□□□□□ -0.07
CD47Q08722 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD47Q08722 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CD47Q08722 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CD47Q08722 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.63□□□□□ -0.07
CD47Q08722 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CD47Q08722 MED15P5-201ENST00000423150 992 ntBASIC14.63□□□□□ -0.07
CD47Q08722 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.63□□□□□ -0.07
CD47Q08722 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 AC109635.5-201ENST00000533593 962 ntBASIC14.63□□□□□ -0.07
CD47Q08722 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.63□□□□□ -0.07
CD47Q08722 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.63□□□□□ -0.07
CD47Q08722 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.63□□□□□ -0.07
CD47Q08722 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 AC023024.2-201ENST00000623561 1993 ntBASIC14.63□□□□□ -0.07
CD47Q08722 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CD47Q08722 AP001282.1-201ENST00000531301 1499 ntBASIC14.63□□□□□ -0.07
CD47Q08722 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.63□□□□□ -0.07
CD47Q08722 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.63□□□□□ -0.07
CD47Q08722 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD47Q08722 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD47Q08722 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.62□□□□□ -0.07
CD47Q08722 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms