Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 AC092384.3-202ENST00000564646 2873 ntBASIC14.78□□□□□ -0.04
TNFRSF17Q02223 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF17Q02223 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC084364.1-201ENST00000551967 1556 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AL121723.1-201ENST00000445194 1519 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC138969.3-201ENST00000546612 1459 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC138932.2-201ENST00000548268 1459 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC126755.4-201ENST00000549796 1459 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 AC073347.1-201ENST00000421633 2643 ntBASIC14.77□□□□□ -0.04
TNFRSF17Q02223 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFRSF17Q02223 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 SRD5A3P1-201ENST00000603021 949 ntBASIC14.77□□□□□ -0.05
TNFRSF17Q02223 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFRSF17Q02223 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.76□□□□□ -0.05
TNFRSF17Q02223 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TNFRSF17Q02223 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms