Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNA1P78396 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNA1P78396 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCNA1P78396 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCNA1P78396 CNN2P10-201ENST00000443067 918 ntBASIC17.68■□□□□ 0.42
CCNA1P78396 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNA1P78396 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNA1P78396 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNA1P78396 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.68■□□□□ 0.42
CCNA1P78396 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCNA1P78396 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNA1P78396 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNA1P78396 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNA1P78396 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNA1P78396 AC022211.2-201ENST00000585075 2527 ntBASIC17.67■□□□□ 0.42
CCNA1P78396 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCNA1P78396 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.67■□□□□ 0.42
CCNA1P78396 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNA1P78396 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA1P78396 POM121L10P-201ENST00000436994 1285 ntBASIC17.67■□□□□ 0.42
CCNA1P78396 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNA1P78396 AC004066.1-201ENST00000502488 802 ntBASIC17.67■□□□□ 0.42
CCNA1P78396 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNA1P78396 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA1P78396 AL096828.3-201ENST00000615354 462 ntBASIC17.67■□□□□ 0.42
CCNA1P78396 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNA1P78396 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CCNA1P78396 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CCNA1P78396 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNA1P78396 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 AC011676.5-201ENST00000624864 2660 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CCNA1P78396 MIR663B-201ENST00000408361 115 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 AC079178.1-201ENST00000420915 656 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNA1P78396 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNA1P78396 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.66■□□□□ 0.42
CCNA1P78396 BX284668.4-201ENST00000453917 508 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNA1P78396 ENPP7P14-201ENST00000621765 1040 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCNA1P78396 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCNA1P78396 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.66■□□□□ 0.42
CCNA1P78396 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 AC020916.1-201ENST00000587762 1774 ntBASIC17.66■□□□□ 0.42
CCNA1P78396 AC148477.4-201ENST00000613430 1793 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms