Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.13□□□□□ -0.15
VBP1P61758 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 ACE3P-201ENST00000423435 1973 ntBASIC14.13□□□□□ -0.15
VBP1P61758 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 AC113367.3-201ENST00000508316 1912 ntBASIC14.12□□□□□ -0.15
VBP1P61758 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VBP1P61758 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.12□□□□□ -0.15
VBP1P61758 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VBP1P61758 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 KRT8P26-201ENST00000534154 1276 ntBASIC14.12□□□□□ -0.15
VBP1P61758 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
VBP1P61758 AC145285.6-201ENST00000604632 637 ntBASIC14.12□□□□□ -0.15
VBP1P61758 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 AC027612.1-201ENST00000445234 2395 ntBASIC14.12□□□□□ -0.15
VBP1P61758 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 AL359881.3-201ENST00000602640 1721 ntBASIC14.12□□□□□ -0.15
VBP1P61758 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.12□□□□□ -0.15
VBP1P61758 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.12□□□□□ -0.15
VBP1P61758 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VBP1P61758 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 AL356585.2-201ENST00000625078 2396 ntBASIC14.11□□□□□ -0.15
VBP1P61758 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.11□□□□□ -0.15
VBP1P61758 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.11□□□□□ -0.15
VBP1P61758 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 MIR4313-201ENST00000580760 101 ntBASIC14.11□□□□□ -0.15
VBP1P61758 AL365330.1-201ENST00000607459 531 ntBASIC14.11□□□□□ -0.15
VBP1P61758 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.11□□□□□ -0.15
VBP1P61758 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VBP1P61758 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.11□□□□□ -0.15
VBP1P61758 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VBP1P61758 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VBP1P61758 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms