Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.48■□□□□ 0.07
CDKN2DP55273 AC125807.1-201ENST00000483097 614 ntBASIC15.48■□□□□ 0.07
CDKN2DP55273 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 SLED1-202ENST00000512051 380 ntBASIC15.48■□□□□ 0.07
CDKN2DP55273 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.48■□□□□ 0.07
CDKN2DP55273 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.48■□□□□ 0.07
CDKN2DP55273 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.48■□□□□ 0.07
CDKN2DP55273 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.48■□□□□ 0.07
CDKN2DP55273 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.48■□□□□ 0.07
CDKN2DP55273 AC023511.2-201ENST00000618803 211 ntBASIC15.48■□□□□ 0.07
CDKN2DP55273 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.48■□□□□ 0.07
CDKN2DP55273 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDKN2DP55273 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN2DP55273 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN2DP55273 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDKN2DP55273 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 RPL13P2-201ENST00000440687 659 ntBASIC15.47■□□□□ 0.07
CDKN2DP55273 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.47■□□□□ 0.07
CDKN2DP55273 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 AC010336.2-201ENST00000564226 506 ntBASIC15.47■□□□□ 0.07
CDKN2DP55273 AC004449.1-201ENST00000564240 433 ntBASIC15.47■□□□□ 0.07
CDKN2DP55273 LINC01115-203ENST00000606068 577 ntBASIC15.47■□□□□ 0.07
CDKN2DP55273 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.47■□□□□ 0.07
CDKN2DP55273 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CDKN2DP55273 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.47■□□□□ 0.07
CDKN2DP55273 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN2DP55273 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN2DP55273 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDKN2DP55273 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
CDKN2DP55273 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDKN2DP55273 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDKN2DP55273 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN2DP55273 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms