Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CACNB3P54284 AL591846.1-201ENST00000451736 433 ntBASIC18.41■□□□□ 0.54
CACNB3P54284 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNB3P54284 KRT8P13-201ENST00000463294 1010 ntBASIC18.41■□□□□ 0.54
CACNB3P54284 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CACNB3P54284 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
CACNB3P54284 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNB3P54284 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNB3P54284 AL022328.3-201ENST00000607943 679 ntBASIC18.41■□□□□ 0.54
CACNB3P54284 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNB3P54284 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNB3P54284 AC006453.4-201ENST00000636949 1252 ntBASIC18.41■□□□□ 0.54
CACNB3P54284 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNB3P54284 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CACNB3P54284 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB3P54284 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB3P54284 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB3P54284 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNB3P54284 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNB3P54284 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CACNB3P54284 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 ACTBP8-201ENST00000403258 1108 ntBASIC18.4■□□□□ 0.54
CACNB3P54284 BTBD6P1-201ENST00000412176 1267 ntBASIC18.4■□□□□ 0.54
CACNB3P54284 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB3P54284 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNB3P54284 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNB3P54284 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.4■□□□□ 0.54
CACNB3P54284 HOMER2P2-201ENST00000451621 847 ntBASIC18.4■□□□□ 0.54
CACNB3P54284 RPSAP36-202ENST00000494591 1261 ntBASIC18.4■□□□□ 0.54
CACNB3P54284 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB3P54284 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.4■□□□□ 0.54
CACNB3P54284 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB3P54284 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNB3P54284 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNB3P54284 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.39■□□□□ 0.54
CACNB3P54284 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.39■□□□□ 0.54
CACNB3P54284 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 AC010491.1-201ENST00000563101 2797 ntBASIC18.39■□□□□ 0.53
CACNB3P54284 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB3P54284 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CACNB3P54284 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB3P54284 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB3P54284 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.39■□□□□ 0.53
CACNB3P54284 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB3P54284 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 AL008638.5-201ENST00000623814 1298 ntBASIC18.39■□□□□ 0.53
CACNB3P54284 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB3P54284 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms