Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.26■□□□□ 0.35
LBX1P52954 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.26■□□□□ 0.35
LBX1P52954 AL135901.1-201ENST00000451812 333 ntBASIC17.26■□□□□ 0.35
LBX1P52954 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.26■□□□□ 0.35
LBX1P52954 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.26■□□□□ 0.35
LBX1P52954 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.26■□□□□ 0.35
LBX1P52954 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.26■□□□□ 0.35
LBX1P52954 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LBX1P52954 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.26■□□□□ 0.35
LBX1P52954 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 CROCCP2-202ENST00000412962 2773 ntBASIC17.26■□□□□ 0.35
LBX1P52954 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
LBX1P52954 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LBX1P52954 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.25■□□□□ 0.35
LBX1P52954 RN7SL494P-201ENST00000461517 304 ntBASIC17.25■□□□□ 0.35
LBX1P52954 RN7SL846P-201ENST00000467429 292 ntBASIC17.25■□□□□ 0.35
LBX1P52954 AC023906.1-201ENST00000486386 453 ntBASIC17.25■□□□□ 0.35
LBX1P52954 AC083801.1-201ENST00000491689 358 ntBASIC17.25■□□□□ 0.35
LBX1P52954 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.25■□□□□ 0.35
LBX1P52954 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.25■□□□□ 0.35
LBX1P52954 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.25■□□□□ 0.35
LBX1P52954 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.25■□□□□ 0.35
LBX1P52954 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.25■□□□□ 0.35
LBX1P52954 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.25■□□□□ 0.35
LBX1P52954 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.25■□□□□ 0.35
LBX1P52954 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LBX1P52954 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LBX1P52954 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.24■□□□□ 0.35
LBX1P52954 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.24■□□□□ 0.35
LBX1P52954 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 AP000593.2-201ENST00000542775 1433 ntBASIC17.24■□□□□ 0.35
LBX1P52954 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LBX1P52954 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.24■□□□□ 0.35
LBX1P52954 AC004066.1-201ENST00000502488 802 ntBASIC17.24■□□□□ 0.35
LBX1P52954 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.24■□□□□ 0.35
LBX1P52954 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.24■□□□□ 0.35
LBX1P52954 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC17.24■□□□□ 0.35
LBX1P52954 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.24■□□□□ 0.35
LBX1P52954 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.24■□□□□ 0.35
LBX1P52954 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
LBX1P52954 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LBX1P52954 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
LBX1P52954 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LBX1P52954 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.24■□□□□ 0.35
LBX1P52954 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 AC244394.1-201ENST00000435000 1665 ntBASIC17.23■□□□□ 0.35
LBX1P52954 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.23■□□□□ 0.35
LBX1P52954 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms