Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14□□□□□ -0.17
CSNK1A1P48729 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 TMBIM7P-203ENST00000641617 1718 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC097493.3-201ENST00000509725 367 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AL512361.1-201ENST00000554200 418 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 AC106028.4-201ENST00000614509 607 ntBASIC13.99□□□□□ -0.17
CSNK1A1P48729 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSNK1A1P48729 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.99□□□□□ -0.17
CSNK1A1P48729 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC092580.3-201ENST00000430932 139 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC092183.1-201ENST00000469884 875 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 DUX4L27-201ENST00000554796 1261 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC025048.3-201ENST00000590609 569 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC005702.4-201ENST00000618393 416 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SSR4P1-203ENST00000599569 2260 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC100757.3-201ENST00000622361 1406 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 AC090616.6-203ENST00000579186 1945 ntBASIC13.98□□□□□ -0.17
CSNK1A1P48729 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSNK1A1P48729 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.98□□□□□ -0.17
CSNK1A1P48729 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms