Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A12P48065 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A12P48065 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC6A12P48065 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC6A12P48065 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC6A12P48065 AC000095.1-201ENST00000603208 874 ntBASIC15.1■□□□□ 0.01
SLC6A12P48065 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC6A12P48065 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC6A12P48065 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC6A12P48065 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 CICP11-201ENST00000434745 2827 ntBASIC15.09■□□□□ 0.01
SLC6A12P48065 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 GHSR-202ENST00000427970 912 ntBASIC15.09■□□□□ 0.01
SLC6A12P48065 AC092183.1-201ENST00000469884 875 ntBASIC15.09■□□□□ 0.01
SLC6A12P48065 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC6A12P48065 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC6A12P48065 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC6A12P48065 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SLC6A12P48065 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
SLC6A12P48065 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC6A12P48065 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A12P48065 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A12P48065 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A12P48065 AGAP7P-201ENST00000582299 2062 ntBASIC15.08■□□□□ 0.01
SLC6A12P48065 AGAP14-201ENST00000624701 2060 ntBASIC15.08■□□□□ 0.01
SLC6A12P48065 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC6A12P48065 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.08■□□□□ 0.01
SLC6A12P48065 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
SLC6A12P48065 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A12P48065 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.08■□□□□ 0
SLC6A12P48065 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.08■□□□□ 0
SLC6A12P48065 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.08■□□□□ 0
SLC6A12P48065 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.08■□□□□ 0
SLC6A12P48065 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.08■□□□□ 0
SLC6A12P48065 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 SPDYE18-201ENST00000510091 1050 ntBASIC15.08■□□□□ 0
SLC6A12P48065 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.08■□□□□ 0
SLC6A12P48065 AC025181.2-201ENST00000606994 802 ntBASIC15.08■□□□□ 0
SLC6A12P48065 AL391069.4-201ENST00000609583 481 ntBASIC15.08■□□□□ 0
SLC6A12P48065 AC008738.7-201ENST00000609744 511 ntBASIC15.08■□□□□ 0
SLC6A12P48065 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 AC106028.4-201ENST00000614509 607 ntBASIC15.08■□□□□ 0
SLC6A12P48065 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.08■□□□□ 0
SLC6A12P48065 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms