Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBEC1P41238 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBEC1P41238 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 MIR770-201ENST00000390219 98 ntBASIC14.18□□□□□ -0.14
APOBEC1P41238 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 KRT18P64-201ENST00000434946 1219 ntBASIC14.18□□□□□ -0.14
APOBEC1P41238 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.18□□□□□ -0.14
APOBEC1P41238 INGX-202ENST00000489074 768 ntBASIC14.18□□□□□ -0.14
APOBEC1P41238 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 AC015910.1-201ENST00000579400 975 ntBASIC14.18□□□□□ -0.14
APOBEC1P41238 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.18□□□□□ -0.14
APOBEC1P41238 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOBEC1P41238 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.18□□□□□ -0.14
APOBEC1P41238 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.18□□□□□ -0.14
APOBEC1P41238 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.17□□□□□ -0.14
APOBEC1P41238 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.17□□□□□ -0.14
APOBEC1P41238 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 FAM8A3P-201ENST00000427218 844 ntBASIC14.17□□□□□ -0.14
APOBEC1P41238 KRT18P43-201ENST00000469825 1281 ntBASIC14.17□□□□□ -0.14
APOBEC1P41238 MEIS3P1-201ENST00000495167 958 ntBASIC14.17□□□□□ -0.14
APOBEC1P41238 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
APOBEC1P41238 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 AC008738.7-201ENST00000609744 511 ntBASIC14.17□□□□□ -0.14
APOBEC1P41238 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.17□□□□□ -0.14
APOBEC1P41238 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 AC009090.5-201ENST00000624886 2285 ntBASIC14.17□□□□□ -0.14
APOBEC1P41238 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOBEC1P41238 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.17□□□□□ -0.14
APOBEC1P41238 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms