Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCNN1AP37088 DRD5P1-201ENST00000456605 1438 ntBASIC16.23■□□□□ 0.19
SCNN1AP37088 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SCNN1AP37088 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCNN1AP37088 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 AL132655.2-201ENST00000596276 594 ntBASIC16.23■□□□□ 0.19
SCNN1AP37088 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.23■□□□□ 0.19
SCNN1AP37088 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.23■□□□□ 0.19
SCNN1AP37088 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCNN1AP37088 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SCNN1AP37088 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.23■□□□□ 0.19
SCNN1AP37088 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCNN1AP37088 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SCNN1AP37088 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 AL442647.2-201ENST00000429864 857 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.22■□□□□ 0.19
SCNN1AP37088 MIR4745-201ENST00000577608 62 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 AL049840.4-201ENST00000602422 811 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 AC004233.3-201ENST00000607794 1269 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 WASH3P-207ENST00000560956 1394 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 AC023024.2-201ENST00000623561 1993 ntBASIC16.22■□□□□ 0.19
SCNN1AP37088 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCNN1AP37088 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCNN1AP37088 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.22■□□□□ 0.19
SCNN1AP37088 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
SCNN1AP37088 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 KC6-207ENST00000600644 2311 ntTSL 3 BASIC16.21■□□□□ 0.19
SCNN1AP37088 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SCNN1AP37088 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 AC236430.1-201ENST00000402231 743 ntBASIC16.21■□□□□ 0.19
SCNN1AP37088 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 HMGN1P19-201ENST00000436976 333 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms