Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 IER3-202ENST00000376377 1350 ntBASIC15.79■□□□□ 0.12
LSP1P33241 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LSP1P33241 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.79■□□□□ 0.12
LSP1P33241 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LSP1P33241 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PPT1-213ENST00000641319 2388 ntBASIC15.79■□□□□ 0.12
LSP1P33241 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
LSP1P33241 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LSP1P33241 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSP1P33241 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LSP1P33241 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LSP1P33241 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
LSP1P33241 GPX1P2-201ENST00000429271 606 ntBASIC15.78■□□□□ 0.12
LSP1P33241 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.78■□□□□ 0.12
LSP1P33241 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.78■□□□□ 0.12
LSP1P33241 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LSP1P33241 AP000550.4-202ENST00000639755 178 ntBASIC15.78■□□□□ 0.12
LSP1P33241 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.78■□□□□ 0.12
LSP1P33241 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 AC105206.1-202ENST00000314927 2368 ntBASIC15.78■□□□□ 0.12
LSP1P33241 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LSP1P33241 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSP1P33241 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.78■□□□□ 0.12
LSP1P33241 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.77■□□□□ 0.12
LSP1P33241 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.77■□□□□ 0.12
LSP1P33241 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 AP005117.1-201ENST00000584346 1413 ntBASIC15.77■□□□□ 0.12
LSP1P33241 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
LSP1P33241 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.77■□□□□ 0.12
LSP1P33241 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LSP1P33241 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LSP1P33241 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LSP1P33241 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSP1P33241 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.77■□□□□ 0.12
LSP1P33241 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.77■□□□□ 0.12
LSP1P33241 POM121L3P-201ENST00000419331 1163 ntBASIC15.77■□□□□ 0.12
LSP1P33241 PCED1CP-201ENST00000419887 785 ntBASIC15.77■□□□□ 0.12
LSP1P33241 IGHV3-47-201ENST00000425060 335 ntBASIC15.77■□□□□ 0.12
LSP1P33241 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms