Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
CTGFP29279 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
CTGFP29279 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.3■□□□□ 0.36
CTGFP29279 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 RN7SKP214-201ENST00000364208 315 ntBASIC17.3■□□□□ 0.36
CTGFP29279 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.3■□□□□ 0.36
CTGFP29279 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.3■□□□□ 0.36
CTGFP29279 HLA-K-203ENST00000430151 1046 ntBASIC17.3■□□□□ 0.36
CTGFP29279 AC078991.1-201ENST00000437297 610 ntBASIC17.3■□□□□ 0.36
CTGFP29279 RN7SL818P-201ENST00000485099 259 ntBASIC17.3■□□□□ 0.36
CTGFP29279 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.3■□□□□ 0.36
CTGFP29279 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CTGFP29279 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.3■□□□□ 0.36
CTGFP29279 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.3■□□□□ 0.36
CTGFP29279 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.3■□□□□ 0.36
CTGFP29279 RN7SL725P-201ENST00000606439 259 ntBASIC17.3■□□□□ 0.36
CTGFP29279 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 AGGF1P2-201ENST00000426656 2106 ntBASIC17.3■□□□□ 0.36
CTGFP29279 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTGFP29279 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.3■□□□□ 0.36
CTGFP29279 AC022211.2-201ENST00000585075 2527 ntBASIC17.29■□□□□ 0.36
CTGFP29279 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 AC124067.4-201ENST00000519691 2379 ntBASIC17.29■□□□□ 0.36
CTGFP29279 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTGFP29279 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.29■□□□□ 0.36
CTGFP29279 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.29■□□□□ 0.36
CTGFP29279 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.29■□□□□ 0.36
CTGFP29279 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.29■□□□□ 0.36
CTGFP29279 SAMD11P1-201ENST00000571429 661 ntBASIC17.29■□□□□ 0.36
CTGFP29279 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 AC007718.1-201ENST00000621078 280 ntBASIC17.29■□□□□ 0.36
CTGFP29279 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.29■□□□□ 0.36
CTGFP29279 E2F3P2-201ENST00000447755 1422 ntBASIC17.29■□□□□ 0.36
CTGFP29279 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTGFP29279 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 INE2-201ENST00000630399 1874 ntBASIC17.29■□□□□ 0.36
CTGFP29279 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTGFP29279 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTGFP29279 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.29■□□□□ 0.36
CTGFP29279 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 AC009093.2-202ENST00000620513 2079 ntBASIC17.28■□□□□ 0.36
CTGFP29279 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.28■□□□□ 0.36
CTGFP29279 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.28■□□□□ 0.36
CTGFP29279 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTGFP29279 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.28■□□□□ 0.36
CTGFP29279 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.28■□□□□ 0.36
CTGFP29279 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.28■□□□□ 0.36
CTGFP29279 RN7SL8P-201ENST00000461771 266 ntBASIC17.28■□□□□ 0.36
CTGFP29279 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTGFP29279 DUX4L47-201ENST00000566374 394 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms