Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ABCD3P28288 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.1
ABCD3P28288 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.1
ABCD3P28288 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.46□□□□□ -0.1
ABCD3P28288 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCD3P28288 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCD3P28288 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ABCD3P28288 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ABCD3P28288 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCD3P28288 KRT18P43-201ENST00000469825 1281 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCD3P28288 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC055876.2-201ENST00000531834 546 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCD3P28288 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ABCD3P28288 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 AL391069.4-201ENST00000609583 481 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 AC009090.5-201ENST00000624886 2285 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ABCD3P28288 AL121723.1-201ENST00000445194 1519 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 SLC7A15P-201ENST00000424028 1363 ntBASIC14.45□□□□□ -0.1
ABCD3P28288 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCD3P28288 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ABCD3P28288 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCD3P28288 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCD3P28288 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ABCD3P28288 AL133267.1-201ENST00000398220 340 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCD3P28288 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 AL353779.1-201ENST00000434793 351 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCD3P28288 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 RRP7BP-205ENST00000566851 833 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 AC015910.1-201ENST00000579400 975 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
ABCD3P28288 AL391825.1-201ENST00000457671 1364 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCD3P28288 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.44□□□□□ -0.1
ABCD3P28288 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms