Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.49□□□□□ -0.25
CD40P25942 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 AL365209.1-201ENST00000624418 6473 ntBASIC13.48□□□□□ -0.25
CD40P25942 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 AC112492.5-201ENST00000421897 457 ntBASIC13.48□□□□□ -0.25
CD40P25942 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CD40P25942 ACTG1P3-201ENST00000431775 1114 ntBASIC13.48□□□□□ -0.25
CD40P25942 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.48□□□□□ -0.25
CD40P25942 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 AC026410.3-201ENST00000514280 936 ntBASIC13.48□□□□□ -0.25
CD40P25942 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.48□□□□□ -0.25
CD40P25942 TDH-203ENST00000531764 1110 ntBASIC13.48□□□□□ -0.25
CD40P25942 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.48□□□□□ -0.25
CD40P25942 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.48□□□□□ -0.25
CD40P25942 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.48□□□□□ -0.25
CD40P25942 AL008721.1-201ENST00000609964 604 ntBASIC13.48□□□□□ -0.25
CD40P25942 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.48□□□□□ -0.25
CD40P25942 RPSAP52-203ENST00000622976 1023 ntBASIC13.48□□□□□ -0.25
CD40P25942 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD40P25942 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.48□□□□□ -0.25
CD40P25942 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.47□□□□□ -0.25
CD40P25942 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CD40P25942 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CD40P25942 AC079776.1-201ENST00000401540 1152 ntBASIC13.47□□□□□ -0.25
CD40P25942 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.47□□□□□ -0.25
CD40P25942 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 ACA64.2-201ENST00000459014 129 ntBASIC13.47□□□□□ -0.25
CD40P25942 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.47□□□□□ -0.25
CD40P25942 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.47□□□□□ -0.25
CD40P25942 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.47□□□□□ -0.25
CD40P25942 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD40P25942 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 MIR5189-201ENST00000577370 114 ntBASIC13.47□□□□□ -0.25
CD40P25942 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.47□□□□□ -0.25
CD40P25942 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.47□□□□□ -0.25
CD40P25942 BTNL10-201ENST00000595971 695 ntBASIC13.47□□□□□ -0.25
CD40P25942 AC093813.1-201ENST00000605066 256 ntBASIC13.47□□□□□ -0.25
CD40P25942 AC017083.2-201ENST00000608069 979 ntBASIC13.47□□□□□ -0.25
CD40P25942 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms