Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CETN4P-206ENST00000642099 2168 ntBASIC17.08■□□□□ 0.33
RFX1P22670 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX1P22670 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.33
RFX1P22670 AC006058.4-201ENST00000624016 1670 ntBASIC17.08■□□□□ 0.32
RFX1P22670 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX1P22670 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 MIR6805-201ENST00000615055 62 ntBASIC17.08■□□□□ 0.32
RFX1P22670 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 AL109954.1-202ENST00000564051 2148 ntBASIC17.08■□□□□ 0.32
RFX1P22670 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX1P22670 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RFX1P22670 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX1P22670 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX1P22670 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX1P22670 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 AC087499.6-201ENST00000411576 835 ntBASIC17.07■□□□□ 0.32
RFX1P22670 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX1P22670 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.07■□□□□ 0.32
RFX1P22670 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX1P22670 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RFX1P22670 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RFX1P22670 AL589739.1-201ENST00000607720 493 ntBASIC17.07■□□□□ 0.32
RFX1P22670 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX1P22670 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX1P22670 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFX1P22670 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX1P22670 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFX1P22670 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX1P22670 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RFX1P22670 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX1P22670 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RFX1P22670 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFX1P22670 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.06■□□□□ 0.32
RFX1P22670 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX1P22670 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFX1P22670 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 AZGP1P1-201ENST00000411909 902 ntBASIC17.06■□□□□ 0.32
RFX1P22670 AC245100.3-201ENST00000441281 285 ntBASIC17.06■□□□□ 0.32
RFX1P22670 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 INE1-201ENST00000456273 945 ntBASIC17.06■□□□□ 0.32
RFX1P22670 AC010336.2-201ENST00000564226 506 ntBASIC17.06■□□□□ 0.32
RFX1P22670 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.06■□□□□ 0.32
RFX1P22670 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms