Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 AC092364.2-201ENST00000596710 2692 ntBASIC15.45■□□□□ 0.06
CDH3P22223 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 AL691432.1-201ENST00000596308 1422 ntBASIC15.45■□□□□ 0.06
CDH3P22223 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH3P22223 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 SERBP1P5-201ENST00000510079 1181 ntBASIC15.45■□□□□ 0.06
CDH3P22223 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH3P22223 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 AC010336.2-201ENST00000564226 506 ntBASIC15.45■□□□□ 0.06
CDH3P22223 AC009407.1-201ENST00000568958 598 ntBASIC15.45■□□□□ 0.06
CDH3P22223 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH3P22223 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH3P22223 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 AC004233.3-201ENST00000607794 1269 ntBASIC15.45■□□□□ 0.06
CDH3P22223 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH3P22223 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH3P22223 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
CDH3P22223 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH3P22223 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH3P22223 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDH3P22223 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH3P22223 CICP14-201ENST00000629111 2732 ntBASIC15.45■□□□□ 0.06
CDH3P22223 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH3P22223 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CDH3P22223 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH3P22223 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH3P22223 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH3P22223 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CDH3P22223 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CDH3P22223 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 AC004987.2-201ENST00000395959 1148 ntBASIC15.44■□□□□ 0.06
CDH3P22223 HAUS4P1-201ENST00000406739 1145 ntBASIC15.44■□□□□ 0.06
CDH3P22223 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH3P22223 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 AC135586.1-201ENST00000539323 574 ntBASIC15.44■□□□□ 0.06
CDH3P22223 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 AC008738.7-201ENST00000609744 511 ntBASIC15.44■□□□□ 0.06
CDH3P22223 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.44■□□□□ 0.06
CDH3P22223 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH3P22223 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH3P22223 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH3P22223 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms