Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SYN1P17600 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 CHMP1AP1-201ENST00000445563 662 ntBASIC16.84■□□□□ 0.29
SYN1P17600 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.84■□□□□ 0.29
SYN1P17600 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.84■□□□□ 0.29
SYN1P17600 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.84■□□□□ 0.29
SYN1P17600 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.84■□□□□ 0.29
SYN1P17600 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SYN1P17600 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SYN1P17600 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYN1P17600 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SYN1P17600 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.83■□□□□ 0.28
SYN1P17600 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SYN1P17600 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.83■□□□□ 0.28
SYN1P17600 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SYN1P17600 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 ISCA2P1-201ENST00000425548 448 ntBASIC16.83■□□□□ 0.28
SYN1P17600 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.83■□□□□ 0.28
SYN1P17600 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.83■□□□□ 0.28
SYN1P17600 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.83■□□□□ 0.28
SYN1P17600 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.83■□□□□ 0.28
SYN1P17600 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.83■□□□□ 0.28
SYN1P17600 AC242376.1-201ENST00000559033 726 ntBASIC16.83■□□□□ 0.28
SYN1P17600 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SYN1P17600 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.83■□□□□ 0.28
SYN1P17600 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.83■□□□□ 0.28
SYN1P17600 MIR6842-201ENST00000612539 65 ntBASIC16.83■□□□□ 0.28
SYN1P17600 AC148477.9-201ENST00000623974 539 ntBASIC16.83■□□□□ 0.28
SYN1P17600 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYN1P17600 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 LTB4R2-202ENST00000528054 3092 ntBASIC16.82■□□□□ 0.28
SYN1P17600 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.82■□□□□ 0.28
SYN1P17600 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 MARK2P5-201ENST00000507649 634 ntBASIC16.82■□□□□ 0.28
SYN1P17600 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYN1P17600 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms