Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 MIR943-201ENST00000401286 94 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 SERBP1P3-201ENST00000459980 809 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AC067863.1-201ENST00000494933 530 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AC010336.2-201ENST00000564226 506 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AC025048.3-201ENST00000590609 569 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AC005702.4-201ENST00000618393 416 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 AL109954.1-202ENST00000564051 2148 ntBASIC14.08□□□□□ -0.16
HLA-DOBP13765 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 KRT18P64-201ENST00000434946 1219 ntBASIC14.07□□□□□ -0.16
HLA-DOBP13765 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.07□□□□□ -0.16
HLA-DOBP13765 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DOBP13765 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DOBP13765 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DOBP13765 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DOBP13765 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DOBP13765 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HLA-DOBP13765 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms