Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AC004461.2-201ENST00000629517 803 ntBASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AC069224.1-201ENST00000566372 1715 ntBASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CR383656.12-201ENST00000549567 513 ntBASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AC243562.2-201ENST00000561247 970 ntBASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMIGD3P0DMS9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMIGD3P0DMS9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms