Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 SAMD11P1-201ENST00000571429 661 ntBASIC17.49■□□□□ 0.39
CYP3A4P08684 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.49■□□□□ 0.39
CYP3A4P08684 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 AP005019.2-201ENST00000615104 511 ntBASIC17.49■□□□□ 0.39
CYP3A4P08684 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 BX539320.1-201ENST00000623759 877 ntBASIC17.49■□□□□ 0.39
CYP3A4P08684 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.49■□□□□ 0.39
CYP3A4P08684 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CYP3A4P08684 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CYP3A4P08684 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 AC136621.1-201ENST00000624017 2304 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 PAUPAR-201ENST00000630360 2965 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.48■□□□□ 0.39
CYP3A4P08684 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 BAATP1-201ENST00000412284 1225 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 NUS1P3-201ENST00000423502 862 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.48■□□□□ 0.39
CYP3A4P08684 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.48■□□□□ 0.39
CYP3A4P08684 SLC25A47P1-201ENST00000531577 414 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 TDH-203ENST00000531764 1110 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 PTP4A1P2-201ENST00000546033 454 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.48■□□□□ 0.39
CYP3A4P08684 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 BTNL10-201ENST00000595971 695 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 AL162274.1-201ENST00000617191 1098 ntBASIC17.48■□□□□ 0.39
CYP3A4P08684 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CYP3A4P08684 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CYP3A4P08684 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CYP3A4P08684 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.47■□□□□ 0.39
CYP3A4P08684 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 AC105917.1-201ENST00000506637 2539 ntBASIC17.47■□□□□ 0.39
CYP3A4P08684 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.47■□□□□ 0.39
CYP3A4P08684 AC012441.1-201ENST00000446669 685 ntBASIC17.47■□□□□ 0.39
CYP3A4P08684 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.47■□□□□ 0.39
CYP3A4P08684 AC068587.3-201ENST00000526613 355 ntBASIC17.47■□□□□ 0.39
CYP3A4P08684 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CYP3A4P08684 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.47■□□□□ 0.39
CYP3A4P08684 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms