Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.99□□□□□ -0.17
ERCC1P07992 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ERCC1P07992 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ERCC1P07992 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ERCC1P07992 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.99□□□□□ -0.17
ERCC1P07992 AC087481.3-201ENST00000602886 1894 ntBASIC13.99□□□□□ -0.17
ERCC1P07992 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.99□□□□□ -0.17
ERCC1P07992 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.99□□□□□ -0.17
ERCC1P07992 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.99□□□□□ -0.17
ERCC1P07992 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ERCC1P07992 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ERCC1P07992 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 AL035456.1-201ENST00000456064 1369 ntBASIC13.98□□□□□ -0.17
ERCC1P07992 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.98□□□□□ -0.17
ERCC1P07992 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.98□□□□□ -0.17
ERCC1P07992 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.98□□□□□ -0.17
ERCC1P07992 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.98□□□□□ -0.17
ERCC1P07992 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.98□□□□□ -0.17
ERCC1P07992 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 AC024267.1-201ENST00000582320 895 ntBASIC13.98□□□□□ -0.17
ERCC1P07992 AL158211.3-201ENST00000607385 239 ntBASIC13.98□□□□□ -0.17
ERCC1P07992 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ERCC1P07992 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ERCC1P07992 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.98□□□□□ -0.17
ERCC1P07992 AP003680.1-201ENST00000598970 3660 ntBASIC13.97□□□□□ -0.17
ERCC1P07992 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.97□□□□□ -0.17
ERCC1P07992 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ERCC1P07992 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.97□□□□□ -0.17
ERCC1P07992 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ERCC1P07992 AC055876.3-201ENST00000431496 288 ntBASIC13.97□□□□□ -0.17
ERCC1P07992 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ERCC1P07992 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.97□□□□□ -0.17
ERCC1P07992 RNA5SP410-201ENST00000516285 106 ntBASIC13.97□□□□□ -0.17
ERCC1P07992 SPCS2P1-201ENST00000561636 679 ntBASIC13.97□□□□□ -0.17
ERCC1P07992 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.97□□□□□ -0.17
ERCC1P07992 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.97□□□□□ -0.17
ERCC1P07992 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.97□□□□□ -0.17
ERCC1P07992 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms