Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
RETP07949 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RETP07949 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.8■□□□□ 0.12
RETP07949 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RETP07949 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.8■□□□□ 0.12
RETP07949 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 MIR326-201ENST00000362220 95 ntBASIC15.8■□□□□ 0.12
RETP07949 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.8■□□□□ 0.12
RETP07949 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.8■□□□□ 0.12
RETP07949 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.8■□□□□ 0.12
RETP07949 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.8■□□□□ 0.12
RETP07949 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RETP07949 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.8■□□□□ 0.12
RETP07949 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.8■□□□□ 0.12
RETP07949 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RETP07949 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.8■□□□□ 0.12
RETP07949 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
RETP07949 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RETP07949 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RETP07949 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.8■□□□□ 0.12
RETP07949 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RETP07949 GGT3P-204ENST00000453783 1664 ntBASIC15.79■□□□□ 0.12
RETP07949 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
RETP07949 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RETP07949 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RETP07949 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.79■□□□□ 0.12
RETP07949 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RETP07949 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RETP07949 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.79■□□□□ 0.12
RETP07949 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RETP07949 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RETP07949 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.79■□□□□ 0.12
RETP07949 INTS4P2-202ENST00000614726 2019 ntBASIC15.79■□□□□ 0.12
RETP07949 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.79■□□□□ 0.12
RETP07949 AC134312.5-201ENST00000568031 1313 ntBASIC15.79■□□□□ 0.12
RETP07949 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.79■□□□□ 0.12
RETP07949 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 AC012441.1-201ENST00000446669 685 ntBASIC15.79■□□□□ 0.12
RETP07949 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 AC023310.1-201ENST00000554836 735 ntBASIC15.79■□□□□ 0.12
RETP07949 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.79■□□□□ 0.12
RETP07949 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.79■□□□□ 0.12
RETP07949 AC124283.3-201ENST00000570869 594 ntBASIC15.79■□□□□ 0.12
RETP07949 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.79■□□□□ 0.12
RETP07949 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.79■□□□□ 0.12
RETP07949 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.79■□□□□ 0.12
RETP07949 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.79■□□□□ 0.12
RETP07949 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.79■□□□□ 0.12
RETP07949 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RETP07949 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms