Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
POLR3DP05423 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR3DP05423 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR3DP05423 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR3DP05423 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
POLR3DP05423 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR3DP05423 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR3DP05423 AP005117.1-202ENST00000581724 1908 ntBASIC18.74■□□□□ 0.59
POLR3DP05423 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR3DP05423 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR3DP05423 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
POLR3DP05423 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3DP05423 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
POLR3DP05423 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 OR8S1-201ENST00000310194 1080 ntBASIC18.73■□□□□ 0.59
POLR3DP05423 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
POLR3DP05423 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR3DP05423 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR3DP05423 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
POLR3DP05423 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR3DP05423 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
POLR3DP05423 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR3DP05423 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
POLR3DP05423 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
POLR3DP05423 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
POLR3DP05423 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 U91328.1-201ENST00000437528 223 ntBASIC18.72■□□□□ 0.59
POLR3DP05423 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR3DP05423 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR3DP05423 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR3DP05423 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.72■□□□□ 0.59
POLR3DP05423 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.72■□□□□ 0.59
POLR3DP05423 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms