Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
APOC3P02656 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC3P02656 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC3P02656 MTCL1P1-201ENST00000446207 792 ntBASIC12.59□□□□□ -0.39
APOC3P02656 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC3P02656 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
APOC3P02656 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOC3P02656 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 KRT8P10-201ENST00000450021 1447 ntBASIC12.59□□□□□ -0.39
APOC3P02656 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC3P02656 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC3P02656 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
APOC3P02656 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC3P02656 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC3P02656 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC3P02656 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.58□□□□□ -0.4
APOC3P02656 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 AP002414.1-201ENST00000391405 1147 ntBASIC12.58□□□□□ -0.4
APOC3P02656 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 HAUS4P1-201ENST00000406739 1145 ntBASIC12.58□□□□□ -0.4
APOC3P02656 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.58□□□□□ -0.4
APOC3P02656 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC3P02656 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC3P02656 AC004263.2-201ENST00000617183 678 ntBASIC12.58□□□□□ -0.4
APOC3P02656 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
APOC3P02656 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 TRIM80P-201ENST00000455685 2848 ntBASIC12.58□□□□□ -0.4
APOC3P02656 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC3P02656 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
APOC3P02656 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC3P02656 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC3P02656 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC3P02656 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC3P02656 AC073548.1-201ENST00000624088 1882 ntBASIC12.57□□□□□ -0.4
APOC3P02656 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC3P02656 AC005622.1-201ENST00000636801 1703 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms