Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHMP2AO43633 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 RRP7BP-205ENST00000566851 833 ntBASIC17.62■□□□□ 0.41
CHMP2AO43633 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.62■□□□□ 0.41
CHMP2AO43633 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP2AO43633 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHMP2AO43633 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP2AO43633 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP2AO43633 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 AC127383.1-201ENST00000444697 1800 ntBASIC17.61■□□□□ 0.41
CHMP2AO43633 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 AC005034.1-201ENST00000426657 489 ntBASIC17.61■□□□□ 0.41
CHMP2AO43633 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP2AO43633 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP2AO43633 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP2AO43633 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP2AO43633 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP2AO43633 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP2AO43633 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
CHMP2AO43633 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP2AO43633 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP2AO43633 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP2AO43633 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP2AO43633 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP2AO43633 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP2AO43633 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP2AO43633 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP2AO43633 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 AP006294.1-201ENST00000415407 339 ntBASIC17.6■□□□□ 0.41
CHMP2AO43633 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.6■□□□□ 0.41
CHMP2AO43633 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.6■□□□□ 0.41
CHMP2AO43633 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP2AO43633 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP2AO43633 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP2AO43633 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP2AO43633 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms