Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
RNF13O43567 AP000344.2-201ENST00000512987 629 ntBASIC14.35□□□□□ -0.11
RNF13O43567 ALG1L8P-201ENST00000533887 760 ntBASIC14.35□□□□□ -0.11
RNF13O43567 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF13O43567 AC092865.5-201ENST00000545435 363 ntBASIC14.35□□□□□ -0.11
RNF13O43567 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF13O43567 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF13O43567 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
RNF13O43567 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 AC004835.2-201ENST00000603762 682 ntBASIC14.35□□□□□ -0.11
RNF13O43567 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
RNF13O43567 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF13O43567 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 AC106881.1-201ENST00000605849 3329 ntBASIC14.35□□□□□ -0.11
RNF13O43567 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 AC097376.2-205ENST00000610159 5334 ntBASIC14.34□□□□□ -0.11
RNF13O43567 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 OR2I1P-209ENST00000641730 5365 ntBASIC14.34□□□□□ -0.11
RNF13O43567 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RNF13O43567 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 RPSAP43-201ENST00000402237 625 ntBASIC14.34□□□□□ -0.11
RNF13O43567 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RNF13O43567 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF13O43567 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF13O43567 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RNF13O43567 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF13O43567 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF13O43567 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.33□□□□□ -0.11
RNF13O43567 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF13O43567 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF13O43567 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF13O43567 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF13O43567 AC090616.6-203ENST00000579186 1945 ntBASIC14.33□□□□□ -0.11
RNF13O43567 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF13O43567 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RNF13O43567 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RNF13O43567 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 AC211486.1-202ENST00000416371 468 ntBASIC14.33□□□□□ -0.12
RNF13O43567 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 FAM58DP-201ENST00000428076 619 ntBASIC14.33□□□□□ -0.12
RNF13O43567 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 RBPMS2P1-201ENST00000437762 623 ntBASIC14.33□□□□□ -0.12
RNF13O43567 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms