Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF9O43307 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF9O43307 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF9O43307 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF9O43307 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AL592424.1-201ENST00000563624 1536 ntBASIC14.68□□□□□ -0.06
ARHGEF9O43307 U82695.1-201ENST00000635752 1889 ntBASIC14.68□□□□□ -0.06
ARHGEF9O43307 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC067863.1-201ENST00000494933 530 ntBASIC14.68□□□□□ -0.06
ARHGEF9O43307 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC091812.2-201ENST00000619081 385 ntBASIC14.68□□□□□ -0.06
ARHGEF9O43307 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.68□□□□□ -0.06
ARHGEF9O43307 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF9O43307 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF9O43307 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 MIR4745-201ENST00000577608 62 ntBASIC14.67□□□□□ -0.06
ARHGEF9O43307 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF9O43307 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF9O43307 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms