Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL354861.1-201ENST00000445213 355 ntBASIC24.5■■□□□ 1.51
CHD1O14646 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CHD1O14646 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CHD1O14646 SIGLEC18P-201ENST00000602271 909 ntBASIC24.5■■□□□ 1.51
CHD1O14646 LINC01783-202ENST00000614408 828 ntBASIC24.5■■□□□ 1.51
CHD1O14646 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC24.5■■□□□ 1.51
CHD1O14646 BX284668.2-205ENST00000619677 828 ntBASIC24.5■■□□□ 1.51
CHD1O14646 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 NOC2LP2-201ENST00000407594 1944 ntBASIC24.5■■□□□ 1.51
CHD1O14646 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CHD1O14646 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC24.5■■□□□ 1.51
CHD1O14646 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHD1O14646 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 RPSAP15-201ENST00000448168 861 ntBASIC24.49■■□□□ 1.51
CHD1O14646 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 AREG-202ENST00000502307 956 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 RPS5-204ENST00000598098 536 ntTSL 2 BASIC24.49■■□□□ 1.51
CHD1O14646 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC24.49■■□□□ 1.51
CHD1O14646 AC002472.4-201ENST00000641915 272 ntBASIC24.49■■□□□ 1.51
CHD1O14646 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC24.49■■□□□ 1.51
CHD1O14646 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CHD1O14646 RN7SKP230-201ENST00000365642 335 ntBASIC24.49■■□□□ 1.51
CHD1O14646 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 TSPY25P-201ENST00000429463 745 ntBASIC24.49■■□□□ 1.51
CHD1O14646 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC24.49■■□□□ 1.51
CHD1O14646 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC24.49■■□□□ 1.51
CHD1O14646 MIR6720-201ENST00000611664 98 ntBASIC24.49■■□□□ 1.51
CHD1O14646 AL627230.2-201ENST00000613254 655 ntBASIC24.49■■□□□ 1.51
CHD1O14646 MIR6816-201ENST00000620368 66 ntBASIC24.49■■□□□ 1.51
CHD1O14646 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CHD1O14646 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC24.48■■□□□ 1.51
CHD1O14646 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC24.48■■□□□ 1.51
CHD1O14646 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC24.48■■□□□ 1.51
CHD1O14646 AP003398.1-201ENST00000531124 318 ntBASIC24.48■■□□□ 1.51
CHD1O14646 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC24.48■■□□□ 1.51
CHD1O14646 MIR3188-201ENST00000583494 85 ntBASIC24.48■■□□□ 1.51
CHD1O14646 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 HMGB1P24-201ENST00000611897 328 ntBASIC24.48■■□□□ 1.51
CHD1O14646 MIR6769A-201ENST00000617340 73 ntBASIC24.48■■□□□ 1.51
CHD1O14646 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 AC009145.4-201ENST00000625119 1294 ntBASIC24.48■■□□□ 1.51
CHD1O14646 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC24.48■■□□□ 1.51
CHD1O14646 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC24.48■■□□□ 1.51
CHD1O14646 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
CHD1O14646 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHD1O14646 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1O14646 BAK1P1-201ENST00000317045 636 ntBASIC24.47■■□□□ 1.51
CHD1O14646 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC24.47■■□□□ 1.51
CHD1O14646 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC24.47■■□□□ 1.51
CHD1O14646 AP000911.2-201ENST00000534330 502 ntBASIC24.47■■□□□ 1.51
CHD1O14646 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 DBP-202ENST00000593500 712 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1O14646 PEBP1P2-201ENST00000603980 558 ntBASIC24.47■■□□□ 1.51
CHD1O14646 AC011471.3-201ENST00000623576 402 ntBASIC24.47■■□□□ 1.51
CHD1O14646 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 ZNF436-AS1-201ENST00000335648 2547 ntBASIC24.47■■□□□ 1.51
CHD1O14646 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
CHD1O14646 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1O14646 AL592076.1-201ENST00000424448 303 ntBASIC24.47■■□□□ 1.51
CHD1O14646 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1O14646 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1O14646 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1O14646 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CHD1O14646 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms