Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC26.13■■□□□ 1.77
CUX2O14529 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
CUX2O14529 VDAC1P1-201ENST00000439229 848 ntBASIC26.13■■□□□ 1.77
CUX2O14529 HNRNPA1P42-201ENST00000458678 957 ntBASIC26.13■■□□□ 1.77
CUX2O14529 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC26.13■■□□□ 1.77
CUX2O14529 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC26.13■■□□□ 1.77
CUX2O14529 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CUX2O14529 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CUX2O14529 AL139339.2-201ENST00000608063 657 ntBASIC26.13■■□□□ 1.77
CUX2O14529 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC26.13■■□□□ 1.77
CUX2O14529 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC26.13■■□□□ 1.77
CUX2O14529 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CUX2O14529 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CUX2O14529 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC26.12■■□□□ 1.77
CUX2O14529 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC26.12■■□□□ 1.77
CUX2O14529 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 AL627422.1-201ENST00000434104 580 ntBASIC26.12■■□□□ 1.77
CUX2O14529 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
CUX2O14529 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC26.12■■□□□ 1.77
CUX2O14529 IL9RP3-201ENST00000442856 1674 ntBASIC26.12■■□□□ 1.77
CUX2O14529 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC26.12■■□□□ 1.77
CUX2O14529 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CUX2O14529 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CUX2O14529 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC26.12■■□□□ 1.77
CUX2O14529 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CUX2O14529 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC26.11■■□□□ 1.77
CUX2O14529 AC084752.1-201ENST00000509766 622 ntBASIC26.11■■□□□ 1.77
CUX2O14529 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC26.11■■□□□ 1.77
CUX2O14529 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CUX2O14529 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC26.11■■□□□ 1.77
CUX2O14529 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC26.11■■□□□ 1.77
CUX2O14529 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC26.11■■□□□ 1.77
CUX2O14529 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 HIST2H2BA-201ENST00000412169 381 ntBASIC26.11■■□□□ 1.77
CUX2O14529 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC26.11■■□□□ 1.77
CUX2O14529 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC26.11■■□□□ 1.77
CUX2O14529 AL592076.1-201ENST00000424448 303 ntBASIC26.11■■□□□ 1.77
CUX2O14529 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CUX2O14529 AC092638.2-201ENST00000441105 947 ntBASIC26.11■■□□□ 1.77
CUX2O14529 AC004837.1-201ENST00000446267 564 ntBASIC26.11■■□□□ 1.77
CUX2O14529 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC26.11■■□□□ 1.77
CUX2O14529 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC26.11■■□□□ 1.77
CUX2O14529 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC26.11■■□□□ 1.77
CUX2O14529 ELP5-212ENST00000574255 671 ntTSL 2 BASIC26.11■■□□□ 1.77
CUX2O14529 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC26.11■■□□□ 1.77
CUX2O14529 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CUX2O14529 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC26.1■■□□□ 1.77
CUX2O14529 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC26.1■■□□□ 1.77
CUX2O14529 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC26.1■■□□□ 1.77
CUX2O14529 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC26.1■■□□□ 1.77
CUX2O14529 RN7SL846P-201ENST00000467429 292 ntBASIC26.1■■□□□ 1.77
CUX2O14529 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC26.1■■□□□ 1.77
CUX2O14529 NAT9-220ENST00000582870 896 ntTSL 5 BASIC26.1■■□□□ 1.77
CUX2O14529 MIR4522-201ENST00000584932 87 ntBASIC26.1■■□□□ 1.77
CUX2O14529 AC055811.3-201ENST00000584952 686 ntBASIC26.1■■□□□ 1.77
CUX2O14529 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC26.1■■□□□ 1.77
CUX2O14529 AC084781.1-201ENST00000613737 656 ntBASIC26.1■■□□□ 1.77
CUX2O14529 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CUX2O14529 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CUX2O14529 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC26.09■■□□□ 1.77
CUX2O14529 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms