Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
PDLIM1O00151 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 AL139385.1-201ENST00000611744 3272 ntBASIC15.04■□□□□ -0
PDLIM1O00151 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 OR2I1P-210ENST00000642037 4691 ntBASIC15.04■□□□□ -0
PDLIM1O00151 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDLIM1O00151 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.04■□□□□ -0
PDLIM1O00151 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.04■□□□□ -0
PDLIM1O00151 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM1O00151 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PDLIM1O00151 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 MRPL20P1-201ENST00000400819 433 ntBASIC15.03■□□□□ -0
PDLIM1O00151 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 VN2R19P-201ENST00000442399 1052 ntBASIC15.03■□□□□ -0
PDLIM1O00151 AL591424.1-201ENST00000442569 1213 ntBASIC15.03■□□□□ -0
PDLIM1O00151 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 KRT18P58-201ENST00000527480 1120 ntBASIC15.03■□□□□ -0
PDLIM1O00151 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PDLIM1O00151 AC027601.4-201ENST00000611259 610 ntBASIC15.03■□□□□ -0
PDLIM1O00151 FAM197Y3-203ENST00000618346 717 ntBASIC15.03■□□□□ -0
PDLIM1O00151 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.03■□□□□ -0
PDLIM1O00151 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.03■□□□□ -0
PDLIM1O00151 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDLIM1O00151 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDLIM1O00151 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.02■□□□□ -0
PDLIM1O00151 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms