Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MIR943-201ENST00000401286 94 ntBASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC092580.3-201ENST00000430932 139 ntBASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC097493.3-201ENST00000509725 367 ntBASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 DUX4L27-201ENST00000554796 1261 ntBASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC138035.3-201ENST00000622706 2791 ntBASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 IGHV3-42-201ENST00000520410 361 ntBASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM6-TRIM34B2RNG4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM6-TRIM34B2RNG4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms