Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.69■□□□□ 0.26
RCCD1A6NED2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RCCD1A6NED2 AC097359.2-201ENST00000604992 2389 ntBASIC16.69■□□□□ 0.26
RCCD1A6NED2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 RN7SL589P-201ENST00000481268 310 ntBASIC16.68■□□□□ 0.26
RCCD1A6NED2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 FAM86C2P-203ENST00000528684 1004 ntBASIC16.68■□□□□ 0.26
RCCD1A6NED2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AC026120.1-201ENST00000611536 926 ntBASIC16.68■□□□□ 0.26
RCCD1A6NED2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 FER1L4-210ENST00000615531 5998 ntBASIC16.68■□□□□ 0.26
RCCD1A6NED2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RCCD1A6NED2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RCCD1A6NED2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 MTHFR-210ENST00000641407 2387 ntBASIC16.67■□□□□ 0.26
RCCD1A6NED2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 AC010740.1-201ENST00000417035 684 ntBASIC16.67■□□□□ 0.26
RCCD1A6NED2 AC069335.1-201ENST00000489972 472 ntBASIC16.67■□□□□ 0.26
RCCD1A6NED2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
RCCD1A6NED2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RCCD1A6NED2 AC005840.4-201ENST00000541242 2494 ntBASIC16.67■□□□□ 0.26
RCCD1A6NED2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 WASH3P-207ENST00000560956 1394 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 FO538757.1-201ENST00000623083 1397 ntBASIC16.66■□□□□ 0.26
RCCD1A6NED2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.66■□□□□ 0.26
RCCD1A6NED2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RCCD1A6NED2 AL590627.1-203ENST00000421194 1026 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms