Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RN7SL618P-201ENST00000477850 296 ntBASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 Z97205.2-201ENST00000564697 1639 ntBASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 DBET-201ENST00000630918 3363 ntBASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC162PA2VCL2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MIR943-201ENST00000401286 94 ntBASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 KRT18P64-201ENST00000434946 1219 ntBASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AL158211.3-201ENST00000607385 239 ntBASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 C18orf15-201ENST00000623680 2534 ntBASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 AC138035.3-201ENST00000622706 2791 ntBASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC162PA2VCL2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms