Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SHISA3A0PJX4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 AC005252.3-201ENST00000623855 2258 ntBASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 AC140658.5-201ENST00000438532 169 ntBASIC13.68□□□□□ -0.22
SHISA3A0PJX4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHISA3A0PJX4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AC092135.3-201ENST00000624151 1846 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 KRT8P37-201ENST00000451609 1420 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 MBLAC2-202ENST00000514906 1936 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 RHOQP3-201ENST00000437982 621 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 VN2R19P-201ENST00000442399 1052 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 EEF1DP4-201ENST00000446006 880 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AC108751.1-201ENST00000490852 363 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AC073389.1-201ENST00000595595 795 ntBASIC13.67□□□□□ -0.22
SHISA3A0PJX4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms